KaryoSeq (Integrated solution for PGT-M, PGT-SR and PGT-A)

KaryoSeq™ is a next‑generation sequencing (NGS)‑based solution for preimplantation genetic testing that enables PGT‑M, PGT‑SR and PGT‑A within a single workflow. It is designed for the analysis of DNA extracted from 3 to 10 trophectoderm cells of human embryos at the blastocyst stage.

Detailed Description

Principle of operation

KaryoSeq™ is based on the MARSALA principle and integrates whole‑genome amplification of single cells using NGS technology to perform, in a single assay, gene locus analysis, chromosomal alterations and SNP linkage through whole‑genome sequencing. The workflow requires the inclusion of an embryo biopsy sample and peripheral blood DNA from relatives to process the data and issue a clinical report.

KaryoSeq principle of operation

Clinical applications

The solution is intended for preimplantation genetic testing for monogenic diseases (PGT‑M), chromosomal structural rearrangements (PGT‑SR) and aneuploidy screening (PGT‑A). The provided material indicates its usefulness in families with a high risk of monogenic diseases, families with chromosomal structural abnormalities such as translocations and duplications, and families with a high risk of aneuploidy, including advanced maternal age, repeated implantation failure and recurrent miscarriages.

KaryoSeq clinical applications

Benefits

It is an all‑in‑one comprehensive solution for PGT‑M/PGT‑SR/PGT‑A, using NGS to address different alterations. A single sequencing run is required to perform several PGT tests from a single sample, with simple laboratory procedures and a lower cost than separate tests.

Key results or indicators

This product reports an accuracy rate of 99.9%, coverage of more than 1,000 monogenic diseases and more than 250,000 embryos analysed.

KaryoSeq key results

Technology used

The solution combines whole‑genome amplification (WGA), NGS library preparation, sequencing and analysis with ChromGo® software.

KaryoSeq technology

Intended user / audience

Solution for molecular diagnostic laboratories with qualified laboratory personnel to perform the procedures.

Key Features

Comprehensive solution for PGT‑M, PGT‑SR and PGT‑A in a single workflow. Designed to start from 3 to 10 trophectoderm cells from blastocyst embryos. Integration with ChromGo® software for data interpretation. Aimed at laboratories seeking a complete, operationally simple and cost‑effective solution. Greater efficiency in each sequencing run thanks to the ability to multiplex with other Yikon product line products.

Presentation Details

Solution format: solution applicable to Illumina platform for PGT analysis by NGS. Documented components/reagents: ChromSwift® Universal Sample Preparation Kit (XK-028-24-I1), Sample Preservation Buffer (XK-043), DNA Fragmentation Kit (XK-108004248), NGS Library Preparation Kit (YK001-001) and NGS index kits for Illumina; analysis is performed with ChromGo® software.
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Area:

Molecular Genetics, Preimplantation genetic diagnosis, Reproduction
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